I can't comment on MS in New York, which is the original topic, but I can comment on MS and CFA which this thread is becomming about.
I have a coleague who graduated from MS in Financial Engineering from certain European university. That programme is notoriously hard and well known among professors. In business however, it got almost no recognition at all. He strugled to get interviewed and in the end he had to return to the former employer. While professors were congratulating him and glorified the programme, nobody in the business world, both in East and West Europe wasn't familiar with the hell he passed through to earn that designation. Now he is working in the same company as before, asking himself why he needed the MS in the first place.
There is no doubt that he acquired enviable level of knowledge on the subject, but now he needs to "verify" that through something more recognizable, so he entered the CFA program and has Level 1 exam this week. Of course, it will be much easier for him to pass L1 since he is more than proficient in almost all concepts covered in that curriculum.
From his experience, and my own with the CFA, I can conclude nothing but - everything in this game is in branding. MBA programs have much more established recruiting routes and are generally much more recognizable. CFA is the story on its own but in some aspects very similar to MS. Since CFA is self study program, you gain the knowledge but no network and soft skills. While you gain some limited network and soft skills in MS, the point of MS is in academic rigor. That is the main difference betwen the two and people tend to forget it often: MS is an academic designation - MBA is professional designation.