The quartzite found in the Santa Ana Mountains is considered one of the most pristine Paleozoic mineral deposits, believed to be metamorphosed since the deposition of the Triassic era.
its clear that quartzite is believed to be metamorphosed since the deposition of the Triassic era. Thus, placing a "which" right after the comma will mess up the meaning as the "which" will then refer to Paleozoic mineral deposits. Therefore, eliminate D and E
option A - Portion after the comma is a dependent clause. Therefore, the comma present is not a comma splice and the sentence as a whole sounds fine though its not flawless. so we hold on to A
Options B and C use conjunction AND after a comma. This is necessary only if the clauses being joined are independent clauses. The portion before the comma is an independent clause. Now, lets look at portion after ",and"
option B - it is believed to have been metamorphosed since the deposition of the Triassic era - independent clause. "it", a singular pronoun, refers to quartzite. "have been" is present perfect tense. While it is fine to say it was believed since past and continues to be believed so in present, "have" is used for plural cases. Here, quartzite is singular. so, eliminate B
option C - that is believed to be metamorphosed since the deposition of the Triassic era - independent clause. "that", a singular pronoun, refers to quartzite. "to be" is simple present tense. all sounds good. It eliminates whatever discomfort we sense in A. therefore the answer is C, the better option.